FINDLOG: search near file: ../k021d/K021D000.000
 READSERIAL_WH: parse file ../k021d/K021D000.LOG
 down looking serial number is : 149
   up looking serial number is : NaN
LOADRDI: Loading data
 loading down-data ../k021d/K021D000.000
ISBB: BB-data 
 raw data has 733+2 bytes per ensemble
 read 4315 ensemble and 25 bins 
 using RDI bottom track
 removed 0 values because of low percent good
 found 3502 finite bottom velocities
 found 51 NaN bottom error velocities and discarded them
 removed 30 values because of high error velocity
 removed 10 bottom values because of high error velocity
 using whole profile since no start time was given
 removed 0 profiles due to larger tilt than 22
 removed 171 profiles due to larger tilt difference than 4
 multiply weight of bin 1 by 0.5
 Outlier discarded 3831 bins down looking
==> load data took 33 seconds
LOADNAV: load NAV time series ../ctdnav/02101.ctd
Warning: COLON arguments must be real scalars.
> In /home/felixt/A20/scripts/loadnav.m at line 33
  In /home/felixt/ladcp/m/laproc.m at line 43
  In /home/felixt/A20/scripts/runme.m at line 85
 number of NAV scans: 28620  delta t : 0.86397 seconds
 update start pos  from:NaN°N     NaN'  NaN°E     NaN'
                     to:38°N 40.0716'   52°W 24.6744'
 updated magnetic deviation and applied correction 
 update end pos    from:NaN°N     NaN'  NaN°E     NaN'
                     to:38°N 41.3448'   52°W 19.2702'
LOADCTD: load CTD time series ../ctdnav/02101.ctd
Warning: COLON arguments must be real scalars.
> In /home/felixt/A20/scripts/loadctd.m at line 46
  In /home/felixt/ladcp/m/laproc.m at line 60
  In /home/felixt/A20/scripts/runme.m at line 85
 number of CTD scans: 28620  delta t : 0.86397 seconds
 max CTD pressure 5442 at 29-Sep-2003 20:40:13
 max LADCP depth 5254 at 29-Sep-2003 20:40:09
 Changed Start Time : 29-Sep-2003 18:50:42  to 29-Sep-2003 19:01:47
 Changed End   Time : 29-Sep-2003 23:05:34  to 29-Sep-2003 22:54:50
 CTD max depth : 5333
 best lag : 1 pings ~ 4 seconds  corr:0.97369
 adjust ADCP time to CTD time and shift depth record 
 adjust start/end position
 WARNING found 100% of  hbot=0  WARNING
 call own bottom track routine to get bottom
 using increased bottom echo amplitudes to create bottom track
 use bin below maximum for bottom track 
 created 189 bottom track data from normal velocities
GETDPTHI: Depth from vertical velocity inverse method
 starting run 1 to LADCP depth
 take soundspeed from CTD profile 
 correct velocities for sound speed 
 maximum depth from int W is :5333.4021
 should be                   :5333.4021
  bottom found at 5354 +/- 0 m
==> get depth took 867 seconds
PREPINV: prepare data for inversion, form Super-Ensembles
 average profiles over (p.avdz) 10 meter
 discarded 0 bottom tracks velocities because of dist > 300
 reduce weight for larger tilts 0.5 at 10 degree
 will not correct for sound speed twice
 remove reference velocity and average ensembles 
 Outlier discarded 736 bins down looking
 reduced ensemble size is 715
LOADSADCP: load SADCP data file ../sadcp/A20_sadcp.mat
 found 17 SADCP profiles 
==> prep inversion took 62 seconds
GETINV:  compute best velocity profile
 Barotropic velocity error 0.0042909 [m/s]
 super ensemble velocity error 0.010357 [m/s]
 set velocity error to:0.018532 [m/s]
 vertical resolution (ps.dz) is 10 [m]
 preaveraged GPS ships vel 1 times 
 smooth Ocean velocity profile
 found 5 ill constrained elements
 smooth CTD velocity profile
 bottom inversion 
 mean bottom track weight : 0.87027
 weight for bottom track is (ps.botfac) 1
 mean sadcp weight : 0.39844
 weight for SADCP vel is (ps.sadcpfac) 1
 add barotropic constrain weight: 4.3188
 weight for drag is (ps.dragfac) 0.19808
 ready for inversion  length of d : 8739
           (CTD vel)  length of A1:715
         (ocean vel)  length of A2:534
Moore-Penrose inverse
 solve only down trace
 smooth Ocean velocity profile
 found 5 ill constrained elements
 smooth CTD velocity profile
Cholesky transform
 solve only up trace
 smooth Ocean velocity profile
 found 5 ill constrained elements
 smooth CTD velocity profile
Cholesky transform
==> inversion took 168 seconds
GETSHEAR2: average shear profile over (ps.dz) 10 [m]
 maximum std (stdf) 2 of data 
 minimum weight  0.1 of data 
 will use 65 % of data 
 increased error because of shear - inverse difference
 compute vertical diffusivity
 use dz:640 m long segments
 save results